Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900533.1_cds_XP_016450565.1_45001
CDS Infomation

[gene=LOC107775349] [db_xref=GeneID:107775349] [protein=non-specific phospholipase C6] [protein_id=XP_016450565.1] [location=join(50822..51145,51519..52281,53070..53246,53913..54211)] [gbkey=CDS]
Sequence

ATGGACCACTTGAGAAGCAAAGCTCCACCATCTGCCACTGTTTTCTTGCTCTTTTTCACC
CTTTCATGGGTTTCTCAGAAAACTTACGGACAGCAAAAACAACCCATTAAAACAGTTGTT
GTGTTGGTGTTGGAGAACAGATCTTTTGATCACTTGCTTGGATGGATGAAAAAATCAGTG
AATCCACATATTAATGGTGTCACTGGCAAAGAGTGCAACCCAATGTCAACTAAAGCCCAA
CTTACTGAAACAATATGCTTCACTGATGATGCTCAGTATGTGGATCCAGACCCTGGTCAC
TCCTTTGAAGCTGTCGAGCAACAGGTATTCGGCTCAGGGTCCATTCCTTCAATGTCAGGC
TTTGTGGAACAAGCACTCAGTATGTCTCAGAACCTATCAAGAACAGTCATGAGAGGATTT
AAGCCAGAAAATGTCCCAATTTACGCGACATTAGTTCGTGAATTTGCAGTATTTGATAGA
TGGTTCTGTTCAATTCCTGGTCCAACTCAACCAAACAGGTTATTTCTATACTCTGCCACT
TCTCATGGTTCCACTAGCCATGTAAAGAAGCTGTTGGCTACTGGATATCCACAAAAGACC
ATATTCGATTCACTTCACGAAAATGGAATAGATTTTGGCATATATCACCAAACATTACCA
GCAACTCTGTTCTTTAGAAATCTGAGGATGTTGAAGTATGTATTCAAGTACCATTCATAT
GATTTGAAGTTCAAGAAAGATGCTAAAAATGGGAATTTGCCGAATTTGACAGTGATTGAG
CCAAGGTATTTTGATATTACGGGTTATCCAGCAAATGATGATCACCCATCACATGATGTT
GCTAATGGGCAGAAATTAGTGAAGGAGATTTATGAGACATTAAGAAGTAGTCCACAGTGG
AATGAGACACTTTTTATTATTACATATGATGAACATGGCGGATTTTATGATCATGTCCAA
ACTCCATACGGTGATGTTCCAAACCCAGATGGAAATACTGGACCTGCACCTAATTTCTTT
AAGTTTGATAGGCTTGGTGTTCGTGTACCAACCATTATGGTTTCTCCTTGGATCAAGAAA
GGAACCGTGATAAGCAAACCGAAGGGACCAAAACCAAATTCGGAGTTCGAGCACTCATCA
ATCCCTGCAACTATAAAGAGAATATTCAATCTCACATCCAGCTTTTTAACTCATAGAGAT
GCTTGGGCTGGCACTTTTGAGCAGGTTGTAGGTCAATTGTCATCTCCAAGGTCTGATTGC
CCTGAGGTTCTGCCTGATGTAGCTCCATTGAGGAGCACAAAAGCGGATGAAACTCGAGGG
TTGTCTGAGTTTCAGAGTGAAATAGTACAGTTAGCAGCCGTGTTGAATGGAGACCATTTC
TTGAGCAGTTTCCCACATGAAATGGGGAAGAAAATGAACGTGAAAGAAGCTCATAATTAC
GTAACAGGTGCAGTTTCAAGATTTATTAGTGCAAGCAAAGAAGCTACTAAGTTAGGAGCA
GATGAGTCGACCATCGTAGATATGAGGTCCTCTCTCACCACTAGATCCTCAGTCCATCAC
TAG

Peptide Sequence

PEP ID

XP_016450565.1
PEP Infomation

PREDICTED: non-specific phospholipase C6 [Nicotiana tabacum]
Sequence

MDHLRSKAPPSATVFLLFFTLSWVSQKTYGQQKQPIKTVVVLVLENRSFDHLLGWMKKSV
NPHINGVTGKECNPMSTKAQLTETICFTDDAQYVDPDPGHSFEAVEQQVFGSGSIPSMSG
FVEQALSMSQNLSRTVMRGFKPENVPIYATLVREFAVFDRWFCSIPGPTQPNRLFLYSAT
SHGSTSHVKKLLATGYPQKTIFDSLHENGIDFGIYHQTLPATLFFRNLRMLKYVFKYHSY
DLKFKKDAKNGNLPNLTVIEPRYFDITGYPANDDHPSHDVANGQKLVKEIYETLRSSPQW
NETLFIITYDEHGGFYDHVQTPYGDVPNPDGNTGPAPNFFKFDRLGVRVPTIMVSPWIKK
GTVISKPKGPKPNSEFEHSSIPATIKRIFNLTSSFLTHRDAWAGTFEQVVGQLSSPRSDC
PEVLPDVAPLRSTKADETRGLSEFQSEIVQLAAVLNGDHFLSSFPHEMGKKMNVKEAHNY
VTGAVSRFISASKEATKLGADESTIVDMRSSLTTRSSVHH

Transcript Sequence

Gene sequence data has not been registered.